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Advances in Tackling Deadly Wheat Disease

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Kenya Plant mutation breeding

Wheat black stem rust, one of the most damaging diseases of wheat, had largely been under control for more than three decades when, in 1999, a new race of the fungus causing the disease was identified in the fields of Uganda. Named Ug99, to reflect where and when it was first identified, the deadly disease began to spread across East Africa to Yemen and as far as Iran, to the point that it threatened the wheat production of 18 countries and, potentially, global food security. In answer to this, the Joint FAO/IAEA Division, working with national and international research institutes, initiated a multi-country program focused on using induced mutations to increase the genetic diversity of wheat which, in turn, would increase the chances of developing wheat varieties with resistance to the black stem rust. In 2014, the first Ug99-resistant varieties, Eldo Ngano-1 and Eldo Mavuno-1, were ready for Kenya’s wheat fields, and six other countries had new resistant lines in advanced field trials.

Wheat black stem rust can turn a healthy looking crop, only weeks away from harvest, into nothing more than a tangle of black stems and shrivelled grains. It is a highly mobile disease, which can spread rapidly over enormous distances. It spreads mostly through wind, but it can also be spread by accidental human transmission – through clothing or plant material.

Wheat black stem rust had largely been under control since the 1960s, mainly because researchers had developed wheat cultivars resistant to the disease. When Ug99 emerged in 1999, it proved to be a particularly devastating race. In fact, some 80 to 90 per cent of global wheat varieties were susceptible, meaning most farmers in its path had no way to fight back.

As the disease spread from its first sighting in Uganda, 17 other countries were considered at risk. The tolls mounted in each country where it emerged, eventually reaching an annual loss of 8.3 million tonnes of wheat grain production with a value of USD 1.23 billion. This presented a potential threat to global food security as well as the multi-billion dollar wheat market.

In 2009, the Joint FAO/IAEA Division initiated and led an interregional project to help in developing new wheat varieties resistant to wheat black stem rust. This project focused on mutation induction with a goal of increasing the genetic diversity of wheat, increasing the chances of finding varieties with resistance to Ug99 that could then be further developed.

Kenya leads the way toward Ug99 defence

Kenya, a hot spot of Ug99, has led the way towards a more diverse defence against Ug99. The early incursion of Ug99 into the country actually became an opportunity to set up a massive search for different sources of resistance to the strain. Each year, researchers in Kenya test as many as 50 000 lines of wheat in fields that are under high disease pressure.

Joint Division experts worked with breeders at Kenya’s Eldoret University, advising on methods of mutation detection and screening for resistant wheat lines. At the beginning of the project, the Joint Division experts set up the project work plan with participating countries. Samples of wheat seeds from the participating countries were irradiated at the Joint Division Plant Breeding and Genetics Laboratory. Through this concerted effort, two resistant mutant varieties in Kenya, named Eldo Ngano-1 and Eldo Mavuno-1, were developed. These names translate from Swahili as Eldoret Story and Eldoret Harvest.

Unprecedented rapid development of resistant varieties

The two new varieties went from mutation induction to the variety being released for planting in less than five years – unprecedented for a process that usually takes much longer. Eldo Ngano-1 proved to be a major breakthrough, and regarded in Kenya as the first Ug99 resistant wheat variety. Due to its unprecedented rapid development, 54 tonnes of Eldo Ngano-1 seed were ready in 2014 for distribution to local farmers for the 2014 to 2015 season, with enough seed for 500 hectare (ha) in its first year of release. During the process, one thousand local farmers had visited demonstration fields in Kenya, and some of them were involved in seed multiplication. The seed gathered from the 2014 harvest will be used to expand the cultivation in 2015.

Other countries participating in the project expect to develop Ug99 resistant varieties from their own mutationinduced local wheat varieties. In six participating countries, 13 mutant lines resistant to Ug99 are in advanced evaluation trials as a prelude to variety release.

The Joint Division demonstrated the effectiveness of mutation breeding in developing new wheat varieties resistant to Ug99. These new resistant varieties are available to Member States and the global wheatbreeding community. They will be used widely in breeding programmes to improve disease resistance in wheat in many regions.

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